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Epigenomics ag chromatin state and protein binding annotation
Chromatin State And Protein Binding Annotation, supplied by Epigenomics ag, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/chromatin+state+and+protein+binding+annotation/chromatin+state+and+protein+binding+annotation/pm40267698-136-6-12
Average 90 stars, based on 1 article reviews
chromatin state and protein binding annotation - by Bioz Stars, 2026-10
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Protein Binding:

Article Title: The Role of MIR9-2 in Shared Susceptibility of Psychiatric Disorders during Childhood: A Population-Based Birth Cohort Study
Article Snippet: .. Information on the chromatin state and protein binding annotation from the Roadmap Epigenomics and The Encyclopedia of DNA Elements (ENCODE) projects are functional evidences integrated in this dataset. ..

Article Title: The osteoporosis risk variant rs9820407 at 3p22.1 acts as an allele-specific enhancer to regulate CTNNB1 expression by long-range chromatin loop formation.
Article Snippet: Previous powerful genome-wide association studies (GWASs) and whole-genome sequencing have identified multiple single-nucleotide polymorphisms (SNPs) located over 69 kb upstream of CTNNB1 at 3p22.1 locus associated with osteoporosis.. The CTNNB1 gene encodes β-catenin that is an integral part of adherens junctions and the primary mediator of the canonical Wnt signaling pathway.. The causal variants and underlying molecular mechanisms of the osteoporosis susceptibility locus 3p22.1 remains unknown.

Article Title: Functional Prediction of Chronic Kidney Disease Susceptibility Gene PRKAG2 by Comprehensively Bioinformatics Analysis
Article Snippet: .. HaploReg v4 included LD information from the 1000 Genomes Project, chromatin state and protein binding annotation from the Roadmap Epigenomics and ENCODE projects, sequence conservation across mammals, the effect of SNPs on regulatory motifs, and the effect of SNPs on expression from eQTL studies ( , ). ..

Article Title: Ovarian cancer variant rs2072590 is associated with HOXD1 and HOXD3 gene expression
Article Snippet: .. HaploReg includes LD information from the 1000 Genomes Project, chromatin state and protein binding annotation from the Roadmap Epigenomics and the Encyclopedia of DNA Elements (ENCODE) projects, sequence conservation across mammals, the effect of SNPs on regulatory motifs, and the effect of SNPs on gene expression from eQTL studies [ ]. ..

Article Title: Four Loci Are Associated with Cardiorespiratory Fitness and Endurance Performance in Young Chinese Females
Article Snippet: .. It included the chromatin state and protein binding annotation from the Roadmap Epigenomics and ENCODE projects, effects on regulatory motifs, expression from eQTL studies, and others. ..

Article Title: CLOCK Polymorphisms in Attention-Deficit/Hyperactivity Disorder (ADHD): Further Evidence Linking Sleep and Circadian Disturbances and ADHD
Article Snippet: .. Information on the chromatin state and protein binding annotation from the Roadmap Epigenomics and ENCODE projects are functional evidence integrated in this dataset. ..

Article Title: Exploring the genetic influence on hair cortisol concentration: Genetic association of rs11621961 on SERPINA6/1 locus in the 2004 Pelotas Birth Cohort (Brazil).
Article Snippet: Genetics plays a critical role in regulating cortisol, as demonstrated by the association of the SERPINA6/1 locus with plasma cortisol concentrations in a genome-wide association meta-analysis (GWAMA).. These genes are integral to glucocorticoid transport and regulation, highlighting a direct genetic influence on cortisol availability.. This study examines the genetic contribution to hair cortisol concentration (HCC) in adolescents from the 2004 Pelotas (Brazil) Birth Cohort at age 15, employing three distinct approaches: 1) polygenic score (PGS), 2) genebased analysis, and 3) candidate variations analysis.

Article Title: Synergistic effects between ADORA2A and DRD2 genes on anxiety disorders in children with ADHD.
Article Snippet: Synergistic effects between ADORA2A and DRD2 genes on anxiety disorders in children with ADHD Thailan T. Fraporti, Verônica Contini, Luciana Tovo-Rodrigues, Mariana Recamonde-Mendoza, Diego L. Rovaris, Luís Augusto Rohde, Mara Helena Hutz, Angélica Salatino-Oliveira, Júlia Pasqualini Genro PII: S0278-5846(18)30788-7 DOI: https://doi.org/10.1016/j.pnpbp.2019.03.021 Reference: PNP 9626 To appear in: Progress in Neuropsychopharmacology & Biological Psychiatry Received date: 8 October 2018 Revised date: 17 March 2019 Accepted date: 29 March 2019 Please cite this article as: T.T.. Fraporti, V. Contini, L. Tovo-Rodrigues, et al., Synergistic effects between ADORA2A and DRD2 genes on anxiety disorders in children with ADHD, Progress in Neuropsychopharmacology & Biological Psychiatry, https://doi.org/ 10.1016/j.pnpbp.2019.03.021 This is a PDF file of an unedited manuscript that has been accepted for publication.. As a service to our customers we are providing this early version of the manuscript.

Functional Assay:

Article Title: The Role of MIR9-2 in Shared Susceptibility of Psychiatric Disorders during Childhood: A Population-Based Birth Cohort Study
Article Snippet: .. Information on the chromatin state and protein binding annotation from the Roadmap Epigenomics and The Encyclopedia of DNA Elements (ENCODE) projects are functional evidences integrated in this dataset. ..

Article Title: CLOCK Polymorphisms in Attention-Deficit/Hyperactivity Disorder (ADHD): Further Evidence Linking Sleep and Circadian Disturbances and ADHD
Article Snippet: .. Information on the chromatin state and protein binding annotation from the Roadmap Epigenomics and ENCODE projects are functional evidence integrated in this dataset. ..

Article Title: Exploring the genetic influence on hair cortisol concentration: Genetic association of rs11621961 on SERPINA6/1 locus in the 2004 Pelotas Birth Cohort (Brazil).
Article Snippet: Genetics plays a critical role in regulating cortisol, as demonstrated by the association of the SERPINA6/1 locus with plasma cortisol concentrations in a genome-wide association meta-analysis (GWAMA).. These genes are integral to glucocorticoid transport and regulation, highlighting a direct genetic influence on cortisol availability.. This study examines the genetic contribution to hair cortisol concentration (HCC) in adolescents from the 2004 Pelotas (Brazil) Birth Cohort at age 15, employing three distinct approaches: 1) polygenic score (PGS), 2) genebased analysis, and 3) candidate variations analysis.

Article Title: Synergistic effects between ADORA2A and DRD2 genes on anxiety disorders in children with ADHD.
Article Snippet: Synergistic effects between ADORA2A and DRD2 genes on anxiety disorders in children with ADHD Thailan T. Fraporti, Verônica Contini, Luciana Tovo-Rodrigues, Mariana Recamonde-Mendoza, Diego L. Rovaris, Luís Augusto Rohde, Mara Helena Hutz, Angélica Salatino-Oliveira, Júlia Pasqualini Genro PII: S0278-5846(18)30788-7 DOI: https://doi.org/10.1016/j.pnpbp.2019.03.021 Reference: PNP 9626 To appear in: Progress in Neuropsychopharmacology & Biological Psychiatry Received date: 8 October 2018 Revised date: 17 March 2019 Accepted date: 29 March 2019 Please cite this article as: T.T.. Fraporti, V. Contini, L. Tovo-Rodrigues, et al., Synergistic effects between ADORA2A and DRD2 genes on anxiety disorders in children with ADHD, Progress in Neuropsychopharmacology & Biological Psychiatry, https://doi.org/ 10.1016/j.pnpbp.2019.03.021 This is a PDF file of an unedited manuscript that has been accepted for publication.. As a service to our customers we are providing this early version of the manuscript.

Sequencing:

Article Title: The osteoporosis risk variant rs9820407 at 3p22.1 acts as an allele-specific enhancer to regulate CTNNB1 expression by long-range chromatin loop formation.
Article Snippet: Previous powerful genome-wide association studies (GWASs) and whole-genome sequencing have identified multiple single-nucleotide polymorphisms (SNPs) located over 69 kb upstream of CTNNB1 at 3p22.1 locus associated with osteoporosis.. The CTNNB1 gene encodes β-catenin that is an integral part of adherens junctions and the primary mediator of the canonical Wnt signaling pathway.. The causal variants and underlying molecular mechanisms of the osteoporosis susceptibility locus 3p22.1 remains unknown.

Article Title: Functional Prediction of Chronic Kidney Disease Susceptibility Gene PRKAG2 by Comprehensively Bioinformatics Analysis
Article Snippet: .. HaploReg v4 included LD information from the 1000 Genomes Project, chromatin state and protein binding annotation from the Roadmap Epigenomics and ENCODE projects, sequence conservation across mammals, the effect of SNPs on regulatory motifs, and the effect of SNPs on expression from eQTL studies ( , ). ..

Article Title: Ovarian cancer variant rs2072590 is associated with HOXD1 and HOXD3 gene expression
Article Snippet: .. HaploReg includes LD information from the 1000 Genomes Project, chromatin state and protein binding annotation from the Roadmap Epigenomics and the Encyclopedia of DNA Elements (ENCODE) projects, sequence conservation across mammals, the effect of SNPs on regulatory motifs, and the effect of SNPs on gene expression from eQTL studies [ ]. ..

Expressing:

Article Title: The osteoporosis risk variant rs9820407 at 3p22.1 acts as an allele-specific enhancer to regulate CTNNB1 expression by long-range chromatin loop formation.
Article Snippet: Previous powerful genome-wide association studies (GWASs) and whole-genome sequencing have identified multiple single-nucleotide polymorphisms (SNPs) located over 69 kb upstream of CTNNB1 at 3p22.1 locus associated with osteoporosis.. The CTNNB1 gene encodes β-catenin that is an integral part of adherens junctions and the primary mediator of the canonical Wnt signaling pathway.. The causal variants and underlying molecular mechanisms of the osteoporosis susceptibility locus 3p22.1 remains unknown.

Article Title: Functional Prediction of Chronic Kidney Disease Susceptibility Gene PRKAG2 by Comprehensively Bioinformatics Analysis
Article Snippet: .. HaploReg v4 included LD information from the 1000 Genomes Project, chromatin state and protein binding annotation from the Roadmap Epigenomics and ENCODE projects, sequence conservation across mammals, the effect of SNPs on regulatory motifs, and the effect of SNPs on expression from eQTL studies ( , ). ..

Article Title: Four Loci Are Associated with Cardiorespiratory Fitness and Endurance Performance in Young Chinese Females
Article Snippet: .. It included the chromatin state and protein binding annotation from the Roadmap Epigenomics and ENCODE projects, effects on regulatory motifs, expression from eQTL studies, and others. ..

Gene Expression:

Article Title: Ovarian cancer variant rs2072590 is associated with HOXD1 and HOXD3 gene expression
Article Snippet: .. HaploReg includes LD information from the 1000 Genomes Project, chromatin state and protein binding annotation from the Roadmap Epigenomics and the Encyclopedia of DNA Elements (ENCODE) projects, sequence conservation across mammals, the effect of SNPs on regulatory motifs, and the effect of SNPs on gene expression from eQTL studies [ ]. ..



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Epigenomics ag chromatin state and protein binding annotation
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Epigenomics ag chromatin state and protein-binding annotation
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